- packagedata (module)
- ParseBoolValue() (in module src.io)
- ParseFileList() (in module src.io)
- ParseFloatValue() (in module src.io)
- ParseInfile() (in module src.io)
- ParseIntValue() (in module src.io)
- ParsePairwiseDistances() (in module phylodistances)
- ParseSeqValue() (in module src.io)
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- ParseStringValue() (in module src.io)
- Path() (in module packagedata)
- phylodistances (module)
- plot (module)
- PlotLogLvsNParams() (in module plot)
- PlotSiteLikelihoods() (in module plot)
- PlotYearVersusDistance() (in module plot)
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